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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. 2610002M06Rik, RIKEN cDNA 2610002M06 gene
Sequence ID:NM_025921
Entrez Gene ID:67028
Ensembl ID:ENSMUSG00000031242

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X D|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 107787343 - 107816281

NM_025921 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
45103104978092104983191
51045176104983604104983676
51775220104986074104986117
52215328104988237104988344
53295397104988431104988499
53985544104988846104988992
55455642105003130105003227
56435842105011473105011672

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4481241Full LengthBC016070RIKEN cDNA 2610002M06 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080197  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025921 NP_080197 Q9CQD4 ESCRT-III

Related Sequences

 
mRNAGenPeptSwissProt
BC016070 AAH16070 Q9CQD4
AK011297 BAB27525 Q9CQD4
AK019383 BAB31692 Q9CQD4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 2610002M06Rik NP_080197 R.norvegicus RGD1566265 363487   NP_001128061 100
D.melanogaster Chmp1 40036   NP_649051 76
A.gambiae AgaP_AGAP006518 1277116   XP_316550 75
C.elegans F23C8.6 171801   NP_490974 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)