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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hspa1b, Heat shock protein 1B
Sequence ID:NM_010478
Entrez Gene ID:15511
Ensembl ID:ENSMUSG00000090877

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17 18.9

Chromosomal Position (from UCSC)

Chromosomal Position:17: 34957618 - 34959819

NM_010478 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
128103509337335096182

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9007352Full LengthBC157921heat shock protein 1B
9088020Full LengthBC151107heat shock protein 1B
9088022Full LengthBC151109heat shock protein 1B
100016049BC152841heat shock protein 1B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034608  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010478 NP_034608 P17879 HSP70

Related Sequences

 
mRNAGenPeptSwissProt
M12573 AAA37863 Q61698
BC151107 AAI51108 Q3TU85
BC151109 AAI51110 Q3TU85
BC152841 AAI52842  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hspa1b NP_034608 M.musculus Hspa1a 193740 Gene Info NP_034609 100
R.norvegicus Hspa1b 294254   NP_997669 98
R.norvegicus Hspa1a 24472   NP_114177 98
H.sapiens HSPA1B 3304 Gene Info NP_005337 95
H.sapiens HSPA1A 3303 Gene Info NP_005336 95
D.melanogaster Hsp70Bc 48583   NP_650209 77
D.melanogaster Hsp70Ab 44920   NP_524798 77
D.melanogaster Hsp70Aa 48581   NP_731651 77
D.melanogaster Hsp70Bbb 50022   NP_788663 77
D.melanogaster Hsp70Ba 44921   NP_731716 77
D.melanogaster Hsp70Bb 48582   NP_524927 77
A.thaliana Hsp70b 838174   NP_173055 74
D.melanogaster Hsp68 42852   NP_524474 74
P.falciparum PF08_0054 2655254   XP_001349336 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)