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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Trf, transferrin
Sequence ID:NM_133977
Entrez Gene ID:22041
Ensembl ID:ENSMUSG00000032554

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F1-F3|9 56.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 103209049 - 103230216

 Exon Info From UCSC:
NM_133977

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3594705Full LengthBC092046transferrin
3981648Full LengthBC012313transferrin
5123741Full LengthBC022986transferrin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598738  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133977 NP_598738 Q921I1 Transferrin

Related Sequences

 
mRNAGenPeptSwissProt
J03299 AAA39438 Q921I1
M23013 AAA40488 Q921I1
M23014 AAA40489 Q921I1
M23015 AAA40490 Q921I1
M23016 AAA40491 Q921I1
S67217 AAB28966 Q921I1
S67218 AAB28967  
BC008559 AAH08559 Q921I1
BC012313 AAH12313 Q921I1
BC022986 AAH22986 Q921I1
BC092046 AAH92046 Q921I1
AF440692 AAL34533 Q921I1
AK085754 BAC39532 Q921I1
AK142599 BAE25124 Q921I1
AK146549 BAE27253 Q921I1
AK149559 BAE28960 Q921I1
AK149595 BAE28981 Q921I1
AK150782 BAE29847 Q921I1
AK168419 BAE40332 Q921I1
AK168938 BAE40747 Q921I1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trf NP_598738 R.norvegicus Tf 24825   NP_001013128 88
H.sapiens TF 7018 Gene Info NP_001054 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta