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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Sema3a, sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
Sequence ID:NM_001243072
Entrez Gene ID:20346
Ensembl ID:ENSMUSG00000028883

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 A1|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 13399576 - 13496401

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6416990Full LengthBC057588sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
30532393Full LengthBC090844sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033178  

Protein Infomation

NM_001243072 NP_001230001    
NM_001243073 NP_001230002    
NM_009152 NP_033178 O08665 Sema

Related Sequences

L40484 AAA73934 O08665
BC057588 AAH57588 O08665
BC090844 AAH90844 O08665
L41541 AAL77611 O08665
D85028 BAA19773 O08665
AK053115 BAC35270  
AK140817 BAE24487  
X85993 CAA59985 O08665

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Sema3a NP_033178 R.norvegicus Sema3a 29751   NP_059006 99
H.sapiens SEMA3A 10371 Gene Info NP_006071 96
D.melanogaster Sema-2a 36846   NP_477507 39
A.gambiae AgaP_AGAP006634 1277221   XP_316666 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)