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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. BC094916, CDNA sequence BC094916
Sequence ID:NM_001024721
Entrez Gene ID:545384
Ensembl ID:ENSMUSG00000070501

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H3|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 173521321 - 173535957

NM_001024721 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1349175451441175451789
350589175456594175456833
590726175457972175458108
7271008175459404175459685
10091294175465802175466087

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30074914Full LengthBC094916cDNA sequence BC094916

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001024721 NP_001019892    

Related Sequences

 
mRNAGenPeptSwissProt
BC094916 AAH94916 Q504N7
JN200820 AEK98514 E9PVL3
AK156095 BAE33585 Q504N7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus BC094916 NP_001019892 M.musculus Pyhin1 236312 Gene Info NP_778191 91
M.musculus Pydc4 623121 Gene Info NP_001170820 49
M.musculus Gm4955 240921 Gene Info XP_136331 49
M.musculus Pydc3 100033459 Gene Info NP_001156410 48
M.musculus Ifi203 15950 Gene Info NP_001038946 44
M.musculus Mndal 100040462   NP_001164324 44
M.musculus Gm16340 100504287 Gene Info XP_003084512 44
M.musculus Ifi205 226695 Gene Info NP_766236 42
M.musculus Ifi204 15951 Gene Info NP_032355 39
M.musculus Mnda 381308 Gene Info NP_001028622 35
M.musculus AI607873 226691 Gene Info XP_985790 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)