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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gabarapl2, gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
Sequence ID:NM_026693
Entrez Gene ID:93739
Ensembl ID:ENSMUSG00000031950

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 111940712 - 111952915

NM_026693 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1135114464617114464751
136191114465059114465114
192364114466401114466573
365630114476214114476479

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4036425Full LengthBC026798gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2
6814986Full LengthBC081436gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080969  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026693 NP_080969 P60521 MAP1_LC3

Related Sequences

 
mRNAGenPeptSwissProt
BC026798 AAH26798 P60521
BC081436 AAH81436 P60521
AF190644 AAK16238 P60521
AK002596 BAB22217 P60521
AK049819 BAC33933 P60521

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gabarapl2 NP_080969 H.sapiens GABARAPL2 11345 Gene Info NP_009216 100
A.thaliana ATG8B 825794   NP_192371 61
A.thaliana APG8A 828287   NP_001078424 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)