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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Atp6v1f, ATPase, H+ transporting, lysosomal V1 subunit F
Sequence ID:NM_025381
Entrez Gene ID:66144
Ensembl ID:ENSMUSG00000004285

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 A3

Chromosomal Position (from UCSC)

Chromosomal Position:6: 29467786 - 29470509

NM_025381 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11922941778229417973
1936352942006629420508

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2812592Full LengthBC016553ATPase, H+ transporting, lysosomal V1 subunit F

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079657  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025381 NP_079657 Q9D1K2 ATP-synt_F

Related Sequences

 
mRNAGenPeptSwissProt
BC016553 AAH16553 Q9D1K2
AK003419 BAB22780 Q9D1K2
AK007327 BAB24962 Q9D1K2
AK152153 BAE30988 Q9D1K2
AK152929 BAE31604 Q9D1K2
AK152959 BAE31622 Q9D1K2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp6v1f NP_079657 R.norvegicus Atp6v1f 116664   NP_446336 100
D.melanogaster Vha14 36731   NP_476969 71
A.gambiae VATF_ANOGA 1273486   XP_312465 70
C.elegans vha-9 174596   NP_496217 69
N.crassa NCU04387 3873618   XP_957464 55
S.cerevisiae VMA7 852903   NP_011534 53
A.thaliana AT4G02620 828221   NP_192171 52
S.pombe vma7 2540982   NP_596676 51
P.falciparum PF11_0412 810958   XP_001348082 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)