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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Trmt112, tRNA methyltransferase 11-2
Sequence ID:NM_001166370
NM_026306
Entrez Gene ID:67674
Ensembl ID:ENSMUSG00000038812

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19|19 E1

Chromosomal Position (from UCSC)

Chromosomal Position:19: 6909775 - 6911026

 Exon Info From UCSC:
NM_001166370
NM_026306

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4162006Full LengthBC019418RIKEN cDNA 0610038D11 gene
4483787Full LengthBC016191RIKEN cDNA 0610038D11 gene
6766768Full LengthBC087959RIKEN cDNA 0610038D11 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080582  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166370 NP_001159842    
NM_026306 NP_080582 Q9DCG9
Q5M8M3
Trm112p

Related Sequences

 
mRNAGenPeptSwissProt
BC016191 AAH16191 Q9DCG9
BC019418 AAH19418 Q8VCR4
BC087959 AAH87959 Q5M8M3
AK002791 BAB22361 Q9DCG9
AK003292 BAB22695 Q9DCG9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trmt112 NP_001159842 M.musculus Gm13072 627985 Gene Info XP_897794 100
D.melanogaster CG12975 40343   NP_649293 51
A.gambiae AgaP_AGAP006575 1277160   XP_316602 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)