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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sord, sorbitol dehydrogenase
Sequence ID:NM_146126
Entrez Gene ID:20322
Ensembl ID:ENSMUSG00000027227

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E5|2 66.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 122234815 - 122265237

NM_146126 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1120122060574122060693
121154122072217122072250
155319122074534122074698
320479122078922122079081
480598122082577122082695
599664122084800122084865
665840122085915122086090
841962122088923122089044
9632259122089776122091072

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4237164Full LengthBC030875sorbitol dehydrogenase
5097505Full LengthBC092291sorbitol dehydrogenase
5099395Full LengthBC024124sorbitol dehydrogenase
4237164IncompleteBC039957sorbitol dehydrogenase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666238  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_146126 NP_666238 Q64442 EC 1.1.1.14 ADH_zinc_N
ADH_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U27014 AAA79043 Q64442 EC 1.1.1.14
BC024124 AAH24124 Q64442 EC 1.1.1.14
BC030875 AAH30875 Q64442 EC 1.1.1.14
BC092291 AAH92291 Q64442 EC 1.1.1.14
AK004692 BAB23478 Q64442 EC 1.1.1.14
AK015059 BAB29695 Q64442 EC 1.1.1.14
AK166988 BAE39168 Q64442 EC 1.1.1.14
AK166996 BAE39175 Q64442 EC 1.1.1.14

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sord NP_666238 R.norvegicus Sord 24788   NP_058748 94
H.sapiens SORD 6652 Gene Info NP_003095 83
A.gambiae AgaP_AGAP003584 1274249   XP_313338 59
D.melanogaster Sodh-1 40836   NP_477348 58
D.melanogaster Sodh-2 41313   NP_524311 57
C.elegans R04B5.5 179405   NP_505591 55
C.elegans R04B5.6 179404   NP_505590 52
A.thaliana AT5G51970 835272   NP_200010 49
S.cerevisiae SOR2 851351   NP_010035 44
S.cerevisiae SOR1 853624   NP_012693 44
N.crassa NCU00891 3880931   XP_964807 44
S.pombe tms1 2540119   NP_595120 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)