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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cd63, CD63 antigen
Sequence ID:NM_001042580
NM_007653
Entrez Gene ID:12512
Ensembl ID:ENSMUSG00000025351

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D3|10 72.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 128909944 - 128912815

 Exon Info From UCSC:
NM_001042580
NM_007653

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3157993Full LengthBC008108CD63 antigen
3157993Full LengthBC012212CD63 antigen
6530532Full LengthBC083161CD63 antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031679  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042580 NP_001036045    
NM_007653 NP_031679 P41731 Tetraspannin

Related Sequences

 
mRNAGenPeptSwissProt
AF159427 AAD43135 Q549D0
P41731
BC008108 AAH08108 P41731
BC012212 AAH12212 P41731
BC083161 AAH83161 P41731
D16432 BAA03904 P41731
AK028220 BAC25821 Q8BT06
AK146618 BAE27307 Q549D0
P41731
AK150647 BAE29734 Q3UC80
AK151702 BAE30625 Q549D0
P41731
AK151963 BAE30834 Q549D0
P41731
AK152072 BAE30925 Q549D0
P41731
AK152372 BAE31162 Q549D0
P41731
AK159875 BAE35447 Q549D0
P41731
AK163785 BAE37493 Q549D0
P41731
AK166543 BAE38843 Q549D0
P41731
AK166766 BAE39004 Q549D0
P41731
AK170344 BAE41734 Q549D0
P41731
CT010179 CAJ18387 Q549D0
P41731

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd63 NP_031679 R.norvegicus Cd63 29186   NP_058821 97
H.sapiens CD63 967 Gene Info NP_001771 79
C.elegans tsp-7 192062   NP_492636 32
D.melanogaster Tsp29Fa 34211   NP_001162915 32
A.gambiae AgaP_AGAP009651 1279031   XP_318688 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)