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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pdpr, pyruvate dehydrogenase phosphatase regulatory subunit
Sequence ID:NM_198308
Entrez Gene ID:319518
Ensembl ID:ENSMUSG00000033624

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 111094654 - 111135147

 Exon Info From UCSC:
NM_198308

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129668Full LengthBC120745RIKEN cDNA 4930402E16 gene
40129940Full LengthBC125425RIKEN cDNA 4930402E16 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_938050  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_198308 NP_938050 Q7TSQ8 DAO
GCV_T
GCV_T_C

Related Sequences

 
mRNAGenPeptSwissProt
BC120745 AAI20746 Q7TSQ8
BC125425 AAI25426 Q7TSQ8
AY223867 AAP20649 Q7TSQ8
AK129472 BAC98282 Q7TSQ8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pdpr NP_938050 R.norvegicus Pdpr 307852   NP_001100900 97
H.sapiens PDPR 55066 Gene Info NP_060460 92
A.gambiae AgaP_AGAP004715 1278513   XP_318114 47
D.melanogaster CG3626 31377   NP_572162 45
C.elegans Y106G6H.5 172922   NP_492730 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)