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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cts7, cathepsin 7
Sequence ID:NM_019539
Entrez Gene ID:56092
Ensembl ID:ENSMUSG00000021440

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 B2|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 61352746 - 61357045

NM_019539 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13756145382161454195
3764936145514961455266
4946566145629561456457
6578816145689461457118
88210226145763561457775
102311456145785961457981
114612826145827161458407
128314936145932061459530

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30018572Full LengthBC064740cathepsin 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062412  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019539 NP_062412 Q91ZF2 Peptidase_C1
Inhibitor_I29

Related Sequences

 
mRNAGenPeptSwissProt
AF250837 AAF81274 Q91ZF2
BC064740 AAH64740 Q91ZF2
AY014779 AAK00508 Q91ZF2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cts7 NP_062412 R.norvegicus Cts7 290970   NP_001099569 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)