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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ifnz, Interferon zeta
Sequence ID:NM_197889
Entrez Gene ID:319146
Ensembl ID:ENSMUSG00000096854

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88782130 - 88783592

NM_197889 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
114628842803488429495

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063890Full LengthBC160242interferon zeta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_922871  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_197889 NP_922871 Q8BQT1 Interferon

Related Sequences

 
mRNAGenPeptSwissProt
BC160242 AAI60242  
AK046550 BAC32782 Q8BQT1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifnz NP_922871 M.musculus Gm13289 545647   XP_620068 99
M.musculus Gm13279 545653 Gene Info XP_620074 99
M.musculus Gm13290 545646 Gene Info XP_620067 99
M.musculus Gm13285 545654 Gene Info NP_001155081 99
M.musculus Gm13288 668208 Gene Info XP_001000025 99
M.musculus Gm13287 545655 Gene Info NP_001155082 99
M.musculus Gm13278 545651 Gene Info NP_001092311 99
M.musculus Gm13272 545648 Gene Info NP_001155080 99
M.musculus Gm13277 545650 Gene Info NP_001092310 99
M.musculus Gm13276 545649 Gene Info NP_001079001 98
M.musculus Gm13275 545652 Gene Info NP_001079002 98
M.musculus Gm13284 668147   XP_999655 98
M.musculus Gm13271 435791 Gene Info NP_001078997 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)