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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Aggf1, angiogenic factor with G patch and FHA domains 1
Sequence ID:NM_025630
Entrez Gene ID:66549
Ensembl ID:ENSMUSG00000021681

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 D1|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 95368428 - 95375329

 Exon Info From UCSC:
NM_025630

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5716440Full LengthBC052410angiogenic factor with G patch and FHA domains 1
1225901IncompleteBC028451angiogenic factor with G patch and FHA domains 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079906  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025630 NP_079906 Q7TN31 FHA
G-patch

Related Sequences

 
mRNAGenPeptSwissProt
BC027286 AAH27286 Q7TN31
BC028451 AAH28451 Q8R044
BC052410 AAH52410 Q7TN31
AY500995 AAR97616 Q7TN31
AK008168 BAB25506 Q7TN31
AK008399 BAB25648 Q7TN31
AK132575 BAE21238 Q3V1B3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aggf1 NP_079906 R.norvegicus Aggf1 310005   XP_226709 89
H.sapiens AGGF1 55109 Gene Info NP_060516 79
D.melanogaster CG8079 36689   NP_725443 35
A.gambiae AgaP_AGAP006281 1276935   XP_316345 32
C.elegans Y55D9A.2 178216   NP_502414 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)