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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vtn, vitronectin
Sequence ID:NM_011707
Entrez Gene ID:22370
Ensembl ID:ENSMUSG00000017344

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B5|11 45.09 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 78499349 - 78502247

NM_011707 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12947831262178312914
2954147831300478313123
4157567831320278313543
7578967831362378313762
89710537831393078314086
105412067831419678314348
120715577831507578315425
155817457831563978315826

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4193767Full LengthBC012690vitronectin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035837  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011707 NP_035837 P29788 Hemopexin
Somatomedin_B

Related Sequences

 
mRNAGenPeptSwissProt
M77123 AAA40558 P29788
BC012690 AAH12690 P29788
AF440693 AAL34534 P29788
AK011736 BAB27809 P29788
AK090325 BAC41171 P29788
X63003 CAA44732 P29788

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vtn NP_035837 R.norvegicus Vtn 29169   NP_062029 88
H.sapiens VTN 7448 Gene Info NP_000629 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)