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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Osbpl9, oxysterol binding protein-like 9
Sequence ID:NM_001134791
NM_133885
NM_173350
Entrez Gene ID:100273
Ensembl ID:ENSMUSG00000028559

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C7|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 109063120 - 109067074

 Exon Info From UCSC:
NM_001134791
NM_133885
NM_173350

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5134780Full LengthBC026927oxysterol binding protein-like 9
5347121Full LengthBC021507oxysterol binding protein-like 9
5367603Full LengthBC089163oxysterol binding protein-like 9
3485451IncompleteBC002157oxysterol binding protein-like 9
5344071IncompleteBC023759oxysterol binding protein-like 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598646  NP_775485  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134791 NP_001128263    
NM_133885 NP_598646 Q8VDM5 Oxysterol_BP
NM_173350 NP_775485 Q8R0G3 Oxysterol_BP

Related Sequences

 
mRNAGenPeptSwissProt
BC002157 AAH02157 Q99LZ2
BC021507 AAH21507 Q8VDM5
BC026927 AAH26927 Q8R0G3
BC089163 AAH89163 Q5FWX7
AK172010 BAE42775 Q8R0G3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Osbpl9 NP_598646 R.norvegicus Osbpl9 298369   NP_001037699 99
H.sapiens OSBPL9 114883 Gene Info NP_078862 98
A.gambiae AgaP_AGAP005510 3289987   XP_556147 62
D.melanogaster CG1513 36028   NP_610534 54
C.elegans obr-4 172253   NP_491691 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)