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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gphn, gephyrin
Sequence ID:NM_145965
NM_172952
Entrez Gene ID:268566
Ensembl ID:ENSMUSG00000047454

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 D2|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 78225120 - 78226525

 Exon Info From UCSC:
NM_145965
NM_172952

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40109771Full LengthBC127058gephyrin
5031146IncompleteBC025195gephyrin
5358943IncompleteBC027112gephyrin

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_145965 NP_666077      
NM_172952 NP_766540 Q8BUV3 EC 2.10.1.1
EC 2.7.7.75
MoCF_biosynth
MoeA_N
MoeA_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC127058 AAI27059 A0JNY3  
AK082353 BAC38476 Q8BUV3 EC 2.10.1.1
EC 2.7.7.75
AK220267 BAD90192 Q571C2  
AJ278768 CAC06105 Q9ESX0  
AJ278769 CAC06106 Q9ESW9  
AJ278770 CAC06107    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gphn NP_766540 H.sapiens GPHN 10243 Gene Info NP_065857 100
R.norvegicus Gphn 64845   NP_074056 100
N.crassa NCU09746 3880588   XP_964448 45
A.gambiae AgaP_AGAP002800 1273162   XP_312114 44
C.elegans moc-1 181225   NP_509700 41
D.melanogaster cin 30973   NP_477030 39
D.melanogaster CG42376 7354420   NP_726659 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta