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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Srp14, signal recognition particle 14
Sequence ID:NM_009273
Entrez Gene ID:20813
Ensembl ID:ENSMUSG00000009549

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E5|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 118475851 - 118479676

NM_009273 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1465118301578118302042
466498118302562118302594
499611118304656118304768
612684118305113118305185
685790118305326118305431

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5353575Full LengthBC021537signal recognition particle 14

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033299  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009273 NP_033299 P16254 SRP14

Related Sequences

 
mRNAGenPeptSwissProt
M29264 AAA40136 P16254
BC021537 AAH21537 P16254
AK019310 BAB31658 P16254
AK156845 BAE33873 P16254
AK167821 BAE39844 P16254
AK168144 BAE40110 P16254

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Srp14 NP_033299 R.norvegicus Srp14 296076   NP_001099967 100
H.sapiens SRP14 6727 Gene Info NP_003125 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)