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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chst11, carbohydrate sulfotransferase 11
Sequence ID:NM_021439
Entrez Gene ID:58250
Ensembl ID:ENSMUSG00000034612

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 82985533 - 83191801

NM_021439 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14868244824182448726
4875728255481382554898
57355198265368982658635

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860648Full LengthBC137629carbohydrate sulfotransferase 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067414  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_021439 NP_067414 Q9JME2 EC 2.8.2.5 Sulfotransfer_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC137629 AAI37630 B9EHC3  
BC144793 AAI44794 B7ZMT9  
AB030378 BAA92942 Q9JME2 EC 2.8.2.5
AJ289133 CAB92141 Q9JME2 EC 2.8.2.5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chst11 NP_067414 R.norvegicus Chst11 314694   NP_001101549 99
H.sapiens CHST11 50515 Gene Info NP_001167453 97
A.gambiae AgaP_AGAP004371 1274517   XP_313654 43
D.melanogaster CG31743 326156   NP_609820 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)