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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cct6a, chaperonin containing Tcp1, subunit 6a (zeta)
Sequence ID:NM_009838
Entrez Gene ID:12466
Ensembl ID:ENSMUSG00000029447

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G1.3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 129787404 - 129794500

 Exon Info From UCSC:
NM_009838

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3597455Full LengthBC018459chaperonin containing Tcp1, subunit 6a (zeta)
6394714Full LengthBC069917chaperonin containing Tcp1, subunit 6a (zeta)
6809215Full LengthBC094352chaperonin containing Tcp1, subunit 6a (zeta)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033968  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009838 NP_033968 Q3TI05
P80317
Cpn60_TCP1

Related Sequences

 
mRNAGenPeptSwissProt
BC018459 AAH18459 Q8VEI1
BC069917 AAH69917 Q3TI05
P80317
BC094352 AAH94352 Q52KG9
AK134428 BAE22141 Q52KG9
AK147130 BAE27700 Q52KG9
AK149757 BAE29065 Q52KG9
AK150977 BAE30006 Q52KG9
AK159785 BAE35369 Q3TW97
AK159975 BAE35527 Q52KG9
AK165612 BAE38294 Q3TI05
P80317
AK166929 BAE39123 Q52KG9
AK167007 BAE39184 Q52KG9
AK167076 BAE39236 Q52KG9
AK167164 BAE39305 Q52KG9
AK167180 BAE39315 Q52KG9
AK167307 BAE39411 Q52KG9
AK167669 BAE39718 Q3TIX8
AK167994 BAE39984 Q3TI62
AK168065 BAE40041 Q3TI05
P80317
AK168940 BAE40748 Q52KG9
AK169033 BAE40824 Q52KG9
Z31557 CAA83432 Q3TI05
P80317

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cct6a NP_033968 R.norvegicus Cct6a 288620   NP_001028856 100
H.sapiens CCT6A 908 Gene Info NP_001753 97
A.gambiae AgaP_AGAP003477 1272849   XP_311767 70
D.melanogaster Tcp-1zeta 32518   NP_573066 70
C.elegans cct-6 175819   NP_741153 68
N.crassa NCU09709 3875086   XP_958948 65
A.thaliana AT5G16070 831464   NP_197111 64
S.pombe cct6 2541128   NP_595369 64
A.thaliana AT3G02530 821160   NP_186902 63
S.cerevisiae CCT6 851768   NP_010474 58
P.falciparum PFF0430w 3885910   XP_966077 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)