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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atg9a, autophagy related 9A
Sequence ID:NM_001003917
Entrez Gene ID:245860
Ensembl ID:ENSMUSG00000033124

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C3|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 75187556 - 75191725

 Exon Info From UCSC:
NM_001003917

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6840050Full LengthBC079884autophagy-related 9A (yeast)
5006099IncompleteBC034139autophagy-related 9A (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001003917  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001003917 NP_001003917 Q68FE2 APG9

Related Sequences

 
mRNAGenPeptSwissProt
BC034139 AAH34139 A1A4C2
BC079884 AAH79884 Q68FE2
AK043624 BAC31599 Q8BRS1
AM085510 CAJ30208 Q3ZAQ4
BK004020 DAA05201 Q3ZAQ4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atg9a NP_001003917 R.norvegicus Atg9a 363254   NP_001014240 100
H.sapiens ATG9A 79065 Gene Info NP_001070666 98
A.gambiae AgaP_AGAP001762 1281414   XP_321322 51
D.melanogaster Atg9 36821   NP_611114 45
C.elegans atg-9 178561   NP_872184 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)