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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Krt71, keratin 71
Sequence ID:NM_019956
Entrez Gene ID:56735
Ensembl ID:ENSMUSG00000051879

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F2|15 63.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 101733948 - 101743097

NM_019956 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
20779101564379101565138
780814101565869101565903
8151035101566977101567197
10361161101568376101568501
11621326101568721101568885
13271422101569199101569294
14231483101569694101569754
14841698101570680101570894
16992193101573033101573527

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129861Full LengthBC125346keratin 71
40129863Full LengthBC125348keratin 71

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064340  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019956 NP_064340 Q9R0H5 Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC125346 AAI25347 Q9R0H5
BC125348 AAI25349 Q9R0H5
AY033497 AAK55110 Q9R0H5
AB033744 BAA85657 Q9R0H5
AK004268 BAB23243 Q9R0H5
AB100413 BAC79434 Q9R0H5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Krt71 NP_064340 H.sapiens KRT71 112802 Gene Info NP_258259 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)