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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Banf1, Barrier to autointegration factor 1
Sequence ID:NM_001038231
NM_011793
Entrez Gene ID:23825
Ensembl ID:ENSMUSG00000024844

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 5364747 - 5366608

 Exon Info From UCSC:
NM_001038231
NM_011793

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3599828Full LengthBC003709barrier to autointegration factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035923  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001038231 NP_001033320 O54962  
NM_011793 NP_035923 O54962 BAF

Related Sequences

 
mRNAGenPeptSwissProt
AF037080 AAC40032 O54962
BC003709 AAH03709 O54962
AB025349 BAA83102 O54962
AK003025 BAB22518 O54962
AK004212 BAB23223 O54962
AK010257 BAB26800 O54962
AK011079 BAB27383 O54962
AK011100 BAB27397 O54962
AK012588 BAB28337 O54962
AK088896 BAC40639 O54962

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Banf1 NP_035923 R.norvegicus Banf1 114087   NP_446083 98
H.sapiens BANF1 8815 Gene Info NP_001137457 97
A.gambiae AgaP_AGAP008753 1275609   XP_314872 73
D.melanogaster baf 34095   NP_609176 63
C.elegans baf-1 176330   NP_499085 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)