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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clgn, calmegin
Sequence ID:NM_009904
Entrez Gene ID:12745
Ensembl ID:ENSMUSG00000002190

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C2|8 38.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 83427549 - 83428547

 Exon Info From UCSC:
NM_009904

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6771060Full LengthBC050767calmegin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034034  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009904 NP_034034 P52194 Calreticulin

Related Sequences

 
mRNAGenPeptSwissProt
U08373 AAA20599 P52194
BC050767 AAH50767 P52194
D14117 BAA03180 P52194
D86323 BAA22591 P52194
AK019534 BAB31782 P52194

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clgn NP_034034 R.norvegicus Clgn 685504   NP_001102942 93
H.sapiens CLGN 1047 Gene Info NP_001124147 80
A.gambiae AgaP_AGAP005032 1274867   XP_001688470 48
D.melanogaster Cnx99A 44643   NP_001036766 47
D.melanogaster CG9906 32620   NP_573131 47
D.melanogaster CG1924 32180   NP_572788 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)