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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. BC048355, cDNA sequence BC048355
Sequence ID:NM_207161
Entrez Gene ID:381101
Ensembl ID:ENSMUSG00000040658

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 C|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 46496788 - 46499618

NM_207161 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11844663373746633920
1852534663537346635441
2543644663559146635701
36511064663582546636566

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5388297Full LengthBC048355cDNA sequence BC048355
30440529IncompleteBC082791cDNA sequence BC048355

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_997044  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_207161 NP_997044 Q80VJ3 Nuc_deoxyrib_tr

Related Sequences

 
mRNAGenPeptSwissProt
BC048355 AAH48355 Q80VJ3
AK146723 BAE27386 Q80VJ3
AK151589 BAE30529 Q80VJ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus BC048355 NP_997044 R.norvegicus RGD620382 171047   NP_598209 93
H.sapiens C6orf108 10591 Gene Info NP_006434 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)