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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ctnnd1, catenin (cadherin associated protein), delta 1
Sequence ID:NM_001085448
NM_001085449
NM_001085450
NM_001085453
NM_007615
Entrez Gene ID:12388
Ensembl ID:ENSMUSG00000034101

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 D|2 47.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 84600782 - 84649480

 Exon Info From UCSC:
NM_001085448
NM_001085449
NM_001085450
NM_001085453
NM_007615

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6406902Full LengthBC043108catenin (cadherin associated protein), delta 1
6408956Full LengthBC054544catenin (cadherin associated protein), delta 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031641  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001085448 NP_001078917    
NM_001085449 NP_001078918    
NM_001085450 NP_001078919    
NM_001085453 NP_001078922    
NM_007615 NP_031641 P30999 Arm

Related Sequences

 
mRNAGenPeptSwissProt
AF140220 AAD43921 Q9WVC4
BC043108 AAH43108 P30999
BC054544 AAH54544 P30999
AB093237 BAC41421 P30999
AK133193 BAE21551 P30999
AK148871 BAE28684 Q3UF77
AK161790 BAE36576 P30999
AK164485 BAE37806 Q3TPD1
Z17804 CAA79078 P30999

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ctnnd1 NP_031641 R.norvegicus Ctnnd1 311163   NP_001101210 100
H.sapiens CTNND1 1500 Gene Info NP_001078927 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)