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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Abcc9, ATP-binding cassette, sub-family C (CFTR/MRP), member 9
Sequence ID:NM_001044720
NM_011511
NM_021041
NM_021042
NM_021043
Entrez Gene ID:20928
Ensembl ID:ENSMUSG00000030249

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 G2|6 70.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 142589132 - 142702273

 Exon Info From UCSC:
NM_001044720
NM_011511
NM_021041
NM_021042

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066379  NP_066378  NP_035641  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001044720 NP_001038185    
NM_011511 NP_035641   ABC_tran
ABC_membrane
Miro
NM_021041 NP_066378 P70170 ABC_tran
ABC_membrane
NM_021042 NP_066379   ABC_tran
ABC_membrane
Miro

Related Sequences

 
mRNAGenPeptSwissProt
U97066 AAB58701 P70170
AF003531 AAB58753 P70170
BC094922 AAH94922 Q504N3
BC147438 AAI47439 Q9D2A3
BC147456 AAI47457 Q9D2A3
DQ991969 ABM30604 D2CFV2
DQ991970 ABM30605 D2CFV3
D86037 BAA12969 P70170
D86038 BAA12970 P70170
AK019938 BAB31925 Q9D2A3
AK052291 BAC34920 Q8C797

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abcc9 NP_035641 R.norvegicus Abcc9 25560   NP_037172 99
H.sapiens ABCC9 10060 Gene Info NP_064693 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)