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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Aftph, aftiphilin
Sequence ID:NM_001252503
NM_181411
Entrez Gene ID:216549
Ensembl ID:ENSMUSG00000049659

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A3.1|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 20722859 - 20726029

Transcript StartTranscript EndChromosomal Start Chromosomal End
2111342058508720586200
113512582059246720592590
125913192059831520598375
132014422060371320603835
144314992060868320608739
150016262060962220609748
162717782061216620612317
177937332062568720627641
373439122064130820641486

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5702534Full LengthBC052036aftiphilin
3586021IncompleteBC004630aftiphilin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252503 NP_001239432    
NM_181411 NP_852076    

Related Sequences

 
mRNAGenPeptSwissProt
BC004630 AAH04630 Q80WT5
BC052036 AAH52036 Q80WT5
AK042681 BAC31329 Q8C993
AK138793 BAE23779 Q3UU49
AK150458 BAE29578 Q3U8A4
AK152308 BAE31114 Q3U8A4
AK152487 BAE31258 Q3U8A4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aftph NP_852076 R.norvegicus Aftph 305544   XP_223651 89
H.sapiens AFTPH 54812 Gene Info NP_982261 79
C.elegans Y45G5AM.9 178820   NP_504163 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)