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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Brpf1, bromodomain and PHD finger containing, 1
Sequence ID:NM_030178
Entrez Gene ID:78783
Ensembl ID:ENSMUSG00000001632

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 E3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 113318593 - 113324860

 Exon Info From UCSC:
NM_030178

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5363697Full LengthBC046521bromodomain and PHD finger containing, 1
8861381Full LengthBC138361bromodomain and PHD finger containing, 1
9053809Full LengthBC145256bromodomain and PHD finger containing, 1
3709119IncompleteBC005647bromodomain and PHD finger containing, 1
4954194IncompleteBC031594bromodomain and PHD finger containing, 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084454  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030178 NP_084454 Q80XK2 Bromodomain
PHD

Related Sequences

 
mRNAGenPeptSwissProt
BC005647 AAH05647 Q99JV4
BC031594 AAH31594 Q8K2E3
BC046521 AAH46521 Q80XK2
BC138361 AAI38362 B2RRD7
BC145256 AAI45257 B7ZNI3
DQ288860 ABB96253 Q2V6Q0
AK019522 BAB31777 Q9CTY1
AK043372 BAC31528 Q8C905
AK156375 BAE33691 Q3U109

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Brpf1 NP_084454 R.norvegicus Brpf1 679713   XP_002729468 100
H.sapiens BRPF1 7862 Gene Info NP_001003694 98
A.gambiae AgaP_AGAP007617 4576217   XP_564621 49
D.melanogaster Br140 35648   NP_610266 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)