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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cdh1, Cadherin 1
Sequence ID:NM_009864
Entrez Gene ID:12550
Ensembl ID:ENSMUSG00000000303

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 D|8 53.3

Chromosomal Position (from UCSC)

Chromosomal Position:8: 106603367 - 106670246

 Exon Info From UCSC:
NM_009864

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30023851Full LengthBC098501cadherin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033994  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009864 NP_033994   Cadherin
Cadherin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC098501 AAH98501 Q4KML8
P09803
X06115 CAA29488 Q4KML8
P09803
X06339 CAA29645 P09803

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdh1 NP_033994 R.norvegicus Cdh1 83502   NP_112624 92
H.sapiens CDH1 999 Gene Info NP_004351 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta