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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sppl3, signal peptide peptidase 3
Sequence ID:NM_029012
Entrez Gene ID:74585
Ensembl ID:ENSMUSG00000029550

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 115011188 - 115097757

 Exon Info From UCSC:
NM_029012

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6817386Full LengthBC086646signal peptide peptidase 3
3154534IncompleteBC023131signal peptide peptidase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083288  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_029012 NP_083288   Peptidase_A22B

Related Sequences

 
mRNAGenPeptSwissProt
BC023131 AAH23131 Q9CUS9
BC078437 AAH78437 Q66L48
BC086646 AAH86646 Q5RJH9
AK014709 BAB29515 Q9CUS9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sppl3 NP_083288 H.sapiens SPPL3 121665 Gene Info NP_620584 100
A.gambiae AgaP_AGAP003207 1273882   XP_312914 70
D.melanogaster CG17370 43128   NP_651437 67
A.thaliana SPPL1 829478   NP_567918 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)