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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Vdac1, voltage-dependent anion channel 1
Sequence ID:NM_011694
Entrez Gene ID:22333
Ensembl ID:ENSMUSG00000020402

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11 29.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 52361054 - 52389387

NM_011694 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5124735Full LengthBC092257voltage-dependent anion channel 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035824  

Protein Infomation

NM_011694 NP_035824   Porin_3

Related Sequences

U30840 AAB47777 Q60932
BC092257 AAH92257 Q60932
AK146239 BAE27004 Q3TIG8
AK153094 BAE31716 Q3U6K8
AK167860 BAE39878 Q3TIG8
AK168225 BAE40179 Q3THL7
AK168672 BAE40522 Q60932
AK169160 BAE40939 Q60932
AK169282 BAE41040 Q60932
AK169354 BAE41103 Q60932
AK169671 BAE41292 Q60932

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Vdac1 NP_035824 R.norvegicus Vdac1 83529   NP_112643 100
H.sapiens VDAC1 7416 Gene Info NP_003365 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)