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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rpp40, ribonuclease P 40 subunit
Sequence ID:NM_145938
Entrez Gene ID:208366
Ensembl ID:ENSMUSG00000021418

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A3.3|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 35893471 - 35906347

NM_145938 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
118223598697235988793
182319573599043335990567
195821563599068335990881
215722823599317435993299
228323783599388135993976
237924473599555635995624
244825923599628735996431
259327363599807235998215

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4236826Full LengthBC024607ribonuclease P 40 subunit (human)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666050  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_145938 NP_666050 Q8R1F9 EC 3.1.26.5 Ribonuc_P_40

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC024607 AAH24607 Q8R1F9 EC 3.1.26.5
AK048810 BAC33465 Q8R1F9 EC 3.1.26.5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rpp40 NP_666050 R.norvegicus Rpp40 291071   NP_001013073 93
H.sapiens RPP40 10799 Gene Info NP_006629 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)