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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pou1f1, POU domain, class 1, transcription factor 1
Sequence ID:NM_008849
Entrez Gene ID:18736
Ensembl ID:ENSMUSG00000004842

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 C1.3|16 43.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 65523276 - 65533981

NM_008849 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11426552096365521104
1432146552389765523968
2154396553006465530288
4406046553216465532328
6056656553322865533288
6668766553410565534315

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30252457Full LengthBC061213POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032875  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008849 NP_032875 Q00286 Homeobox
Pou

Related Sequences

 
mRNAGenPeptSwissProt
BC061213 AAH61213 Q00286
D12885 BAA02289 Q00286
AB622207 BAK09361 F1T2M3
X57512 CAA40737 Q00286
Z29628 CAA82735 Q62089

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pou1f1 NP_032875 R.norvegicus Pou1f1 25517   NP_037140 98
H.sapiens POU1F1 5449 Gene Info NP_001116229 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)