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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cyp2c40, cytochrome P450, family 2, subfamily c, polypeptide 40
Sequence ID:NM_010004
Entrez Gene ID:13099
Ensembl ID:ENSMUSG00000025004

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C3|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 39767072 - 39812728

NM_010004 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
124283984156339841979
4295703984831339848454
5717583985240339852590
7599003986124839861389
90110773987696939877145
107812383987825939878419
123913883988165539881804
138915513988200439882166
155218113988704439887303

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862493Full LengthBC139471cytochrome P450, family 2, subfamily c, polypeptide 40
8862494Full LengthBC139472cytochrome P450, family 2, subfamily c, polypeptide 40

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034134  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_010004 NP_034134 P56657 EC 1.14.14.1 p450

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF047727 AAD13722 P56657 EC 1.14.14.1
BC139471 AAI39472 P56657 EC 1.14.14.1
BC139472 AAI39473 P56657 EC 1.14.14.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cyp2c40 NP_034134 M.musculus Cyp2c68 433247 Gene Info NP_001034644 97
M.musculus Cyp2c67 545288 Gene Info NP_001019890 96
M.musculus Cyp2c69 100043108 Gene Info NP_001097995 95
R.norvegicus Cyp2c13 171521   NP_612523 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)