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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tecr, trans-2,3-enoyl-CoA reductase
Sequence ID:NM_027179
NM_134118
Entrez Gene ID:106529
Ensembl ID:ENSMUSG00000031708

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C3|8 43.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 83571699 - 83594462

 Exon Info From UCSC:
NM_027179
NM_134118

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4240045Full LengthBC019984glycoprotein, synaptic 2
5064002Full LengthBC094046glycoprotein, synaptic 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598879  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_027179 NP_081455      
NM_134118 NP_598879 Q9CY27 EC 1.3.1.93 Steroid_dh

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC019984 AAH19984 Q9CY27 EC 1.3.1.93
BC094046 AAH94046 Q52L67  
BC115455 AAI15456 Q14C44  
AK010513 BAB26996 Q9CWN2  
AK010984 BAB27305 Q9CY27 EC 1.3.1.93
AK171718 BAE42630 Q3TAN8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tecr NP_598879 R.norvegicus Tecr 191576   NP_612558 99
H.sapiens TECR 9524 Gene Info NP_612510 97
A.gambiae AgaP_AGAP010714 1272513   XP_311426 55
D.melanogaster Sc2 38457   NP_647836 54
C.elegans art-1 174140   NP_495430 53
S.pombe SPBC646.07c 2541070   NP_595365 44
A.thaliana CER10 824702   NP_191096 44
P.falciparum PF11_0370 810917   XP_001348041 41
S.cerevisiae TSC13 851547   NP_010269 38
N.crassa NCU03362 3872444   XP_956297 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)