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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sarnp, SAP domain containing ribonucleoprotein
Sequence ID:NM_025364
Entrez Gene ID:66118
Ensembl ID:ENSMUSG00000078427

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10|10 C1

Chromosomal Position (from UCSC)

Chromosomal Position:10: 128821918 - 128877617

 Exon Info From UCSC:
NM_025364

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1382354Full LengthBC027510RIKEN cDNA 1110005A23 gene
9007329Full LengthBC158023RIKEN cDNA 1110005A23 gene
9054349Full LengthBC172063RIKEN cDNA 1110005A23 gene
9088111Full LengthBC157909RIKEN cDNA 1110005A23 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079640  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025364 NP_079640 Q9D1J3 SAP

Related Sequences

 
mRNAGenPeptSwissProt
BC027510 AAH27510 Q9D1J3
BC157909 AAI57910 B2RXM7
BC158023 AAI58024 B2RXM7
BC172063 AAI72063 B7ZWI2
AK003453 BAB22799 Q9D1J3
AK018773 BAB31400 Q9D1J3
AK088266 BAC40246 Q9D1J3
AK146248 BAE27010 Q9D1J3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sarnp NP_079640 R.norvegicus Sarnp 362819   NP_001028242 99
H.sapiens SARNP 84324 Gene Info NP_149073 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)