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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cnot2, CCR4-NOT transcription complex, subunit 2
Sequence ID:NM_001037846
Entrez Gene ID:72068
Ensembl ID:ENSMUSG00000020166

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D2|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 116485508 - 116581501

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5003026Full LengthBC063105CCR4-NOT transcription complex, subunit 2
6415034Full LengthBC065171CCR4-NOT transcription complex, subunit 2
6815664Full LengthBC090624CCR4-NOT transcription complex, subunit 2
6811456IncompleteBC043133CCR4-NOT transcription complex, subunit 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082358  

Protein Infomation

NM_001037846 NP_001032935 Q8C5L3  
NM_001037847 NP_001032936 Q8C5L3  
NM_001037848 NP_001032937    
NM_028082 NP_082358   NOT2_3_5

Related Sequences

BC043133 AAH43133 Q8C5L3
BC063105 AAH63105 Q8C5L3
BC065171 AAH65171 Q8C5L3
BC090624 AAH90624 Q5CZY5
AK011231 BAB27481 Q8C5L3
AK078121 BAC37134 Q8C5L3
AK149767 BAE29072 Q8C5L3
AK167834 BAE39856 Q3TIJ0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Cnot2 NP_001032935 H.sapiens CNOT2 4848 Gene Info NP_001186231 100
R.norvegicus Cnot2 299805   NP_001011988 100
A.gambiae AgaP_AGAP003525 1274183   XP_562364 51
D.melanogaster Rga 40683   NP_524239 44
A.thaliana AT1G07705 837284   NP_001077478 43
S.pombe not2 2538778   NP_587823 41
A.thaliana VIP2 836092   NP_568912 37
S.cerevisiae CDC36 851389   NP_010116 33
N.crassa NCU11372 5847192   XP_001728090 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)