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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Prcc, papillary renal cell carcinoma (translocation-associated)
Sequence ID:NM_033573
Entrez Gene ID:94315
Ensembl ID:ENSMUSG00000004895

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 F2.1-2.2

Chromosomal Position (from UCSC)

Chromosomal Position:3: 87858913 - 87885580

NM_033573 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
394818766282587663267
4825478766406787664132
5486918766605287666195
6927878767123687671331
78813548767350487674070
135514028767613187676178
140320908768879687689483

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4191155Full LengthBC082784papillary renal cell carcinoma (translocation-associated)
5717482Full LengthBC052072papillary renal cell carcinoma (translocation-associated)
5320904IncompleteBC027831papillary renal cell carcinoma (translocation-associated)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033573 NP_291051 Q9EQC8  

Related Sequences

 
mRNAGenPeptSwissProt
AF273750 AAG36941 Q9EQC8
BC027831 AAH27831 Q05CA9
BC052072 AAH52072 Q9EQC8
BC082784 AAH82784 Q9EQC8
AK078394 BAC37252 Q9EQC8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prcc NP_291051 R.norvegicus Prcc 310687   NP_001101170 99
H.sapiens PRCC 5546 Gene Info NP_005964 94
A.gambiae AgaP_AGAP006356 5666903   XP_001688851 31
D.melanogaster CG17249 38201   NP_647638 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)