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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chac1, ChaC, cation transport regulator 1
Sequence ID:NM_026929
Entrez Gene ID:69065
Ensembl ID:ENSMUSG00000027313

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E5|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 119351289 - 119354322

NM_026929 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1395119176977119177371
396431119178092119178127
4321567119178924119180059

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4483043Full LengthBC025169ChaC, cation transport regulator-like 1 (E. coli)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081205  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026929 NP_081205 Q8R3J5 ChaC

Related Sequences

 
mRNAGenPeptSwissProt
BC025169 AAH25169 Q8R3J5
AK007378 BAB24997 Q8R3J5
AK032218 BAC27764 Q8R3J5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chac1 NP_081205 R.norvegicus Chac1 362196   XP_342498 97
H.sapiens CHAC1 79094 Gene Info NP_077016 88
C.elegans F22F7.7 178693   NP_503578 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)