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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Fnta, farnesyltransferase, CAAX box, alpha
Sequence ID:NM_008033
Entrez Gene ID:14272
Ensembl ID:ENSMUSG00000015994

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A2|8 8.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 25998721 - 26015601

NM_008033 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18432710919327110035
84410152711024027110411
101610782711144127111503
107912272711488727115035
122813542711765827117784
135514592712013627120240
146015742712156127121675
157516602712394127124026
166118812712585227126072

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4019240Full LengthBC012711farnesyltransferase, CAAX box, alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032059  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008033 NP_032059 Q541Z2
Q61239
EC 2.5.1.59
EC 2.5.1.58
PPTA

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC012711 AAH12711 Q61239 EC 2.5.1.59
EC 2.5.1.58
D49744 BAA08578 Q541Z2
Q61239
EC 2.5.1.59
EC 2.5.1.58
AK010744 BAB27154 Q541Z2
Q61239
EC 2.5.1.59
EC 2.5.1.58
AK090346 BAC41179 Q541Z2
Q61239
EC 2.5.1.59
EC 2.5.1.58
AK153252 BAE31843 Q541Z2
Q61239
EC 2.5.1.59
EC 2.5.1.58

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Fnta NP_032059 R.norvegicus Fnta 25318   NP_036979 98
H.sapiens FNTA 2339 Gene Info NP_002018 93
A.gambiae AgaP_AGAP011767 1280873   XP_320743 53
D.melanogaster CG2976 33682   NP_608862 51
A.thaliana FTA 825107   NP_567084 46
C.elegans R02D3.5 176840   NP_499882 41
S.pombe cwp1 2543143   NP_593518 38
N.crassa NCU03632 3877482   XP_961359 35
S.cerevisiae RAM2 853849   NP_012906 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)