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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Prdx2, peroxiredoxin 2
Sequence ID:NM_011563
Entrez Gene ID:21672
Ensembl ID:ENSMUSG00000005161

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C3|8 36.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 84969621 - 84974808

NM_011563 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11158749354687493660
1162208749413887494242
2213748749433487494487
3754978749518587495307
4986288749546087495590
6299428749789887498211

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3485635Full LengthBC002034peroxiredoxin 2
5700069Full LengthBC086783peroxiredoxin 2
6818396Full LengthBC081454peroxiredoxin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035693  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011563 NP_035693 Q61171 EC 1.11.1.15 AhpC-TSA
Redoxin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U20611 AAA69475 Q61171 EC 1.11.1.15
U51679 AAB01941 Q61171 EC 1.11.1.15
BC002034 AAH02034 Q61171 EC 1.11.1.15
BC081454 AAH81454 Q61171 EC 1.11.1.15
BC086783 AAH86783 Q5M9N9  
AK005225 BAB23893 Q61171 EC 1.11.1.15
AK008433 BAB25666 Q61171 EC 1.11.1.15
AK010653 BAB27093 Q61171 EC 1.11.1.15
AK088280 BAC40255 Q61171 EC 1.11.1.15
X82067 CAA57566 Q61171 EC 1.11.1.15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prdx2 NP_035693 R.norvegicus Prdx2 29338   NP_058865 98
H.sapiens PRDX2 7001 Gene Info NP_005800 93
C.elegans prdx-2 266858   NP_001122604 71
D.melanogaster Jafrac1 53578   NP_477510 71
S.pombe tpx1 2539572   NP_588430 68
A.gambiae TPX2 1269440   XP_308081 67
S.cerevisiae TSA1 854980   NP_013684 66
A.thaliana AT3G11630 820335   NP_187769 65
A.thaliana 2-Cys Prx B 830517   NP_568166 64
P.falciparum TPx1 811950   XP_001348542 48
P.falciparum TPx2 811198   XP_001350554 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)