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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Amfr, autocrine motility factor receptor
Sequence ID:NM_011787
Entrez Gene ID:23802
Ensembl ID:ENSMUSG00000031751

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C5|8 45.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 93971925 - 94012835

 Exon Info From UCSC:
NM_011787

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3710780Full LengthBC040338autocrine motility factor receptor
4209258Full LengthBC034538autocrine motility factor receptor
3500628IncompleteBC003256autocrine motility factor receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035917  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011787 NP_035917   zf-C3HC4
CUE

Related Sequences

 
mRNAGenPeptSwissProt
AF124144 AAD56721 Q9R049
BC003256 AAH03256 Q9R049
BC034538 AAH34538 Q9R049
Q3TCI2
BC040338 AAH40338 Q9R049
Q3TCI2
AK157327 BAE34049 Q9R049
Q3U007
AK170716 BAE41974 Q3TCI2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Amfr NP_035917 H.sapiens AMFR 267 Gene Info NP_001135 95
R.norvegicus Amfr 361367   XP_341645 93
A.gambiae AgaP_AGAP007538 4576491   XP_001237062 49
C.elegans hrdl-1 172833   NP_492602 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)