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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cygb, cytoglobin
Sequence ID:NM_030206
Entrez Gene ID:114886
Ensembl ID:ENSMUSG00000020810

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 116646958 - 116653919

NM_030206 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11398116506908116508305
13991562116510596116510759
15631794116511097116511328
17952331116515090116515626

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6491041Full LengthBC055040cytoglobin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084482  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030206 NP_084482 Q9CX80
Q546K1
Globin

Related Sequences

 
mRNAGenPeptSwissProt
BC055040 AAH55040 Q9CX80
Q546K1
AK019410 BAB31709 Q9CX80
Q546K1
AK087408 BAC39862 Q8BN80
AK163073 BAE37181 Q9CX80
Q546K1
AK172475 BAE43027 Q9CX80
Q546K1
AJ315163 CAC86187 Q9CX80
Q546K1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cygb NP_084482 R.norvegicus Cygb 170520   NP_570100 97
H.sapiens CYGB 114757 Gene Info NP_599030 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)