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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Brd2, bromodomain containing 2
Sequence ID:NM_001025387
NM_001204973
NM_010238
NR_037970
Entrez Gene ID:14312
Ensembl ID:ENSMUSG00000024335

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17 18.53 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 34113758 - 34118670

 Exon Info From UCSC:
NM_001025387
NM_010238

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861675Full LengthBC138655bromodomain containing 2
8861676Full LengthBC138656bromodomain containing 2
5354747IncompleteBC085251bromodomain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034368  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204973 NP_001191902    
NM_010238 NP_034368 Q7JJ13 Bromodomain

Related Sequences

 
mRNAGenPeptSwissProt
AF045462 AAC24810 Q7JJ13
BC138655 AAI38656 B2RS09
BC138656 AAI38657 B2RS09
AF318183 AAK07919 Q7JJ13
AB010246 BAA24377 Q7JJ13
AB010247 BAA24378 Q7JJ13
AB010248 BAA24379 Q7JJ13
AK220444 BAD90273 Q7JJ13
AB212273 BAD97682 Q7JJ13
AK147918 BAE28228 Q7JJ13
AK158970 BAE34749 Q7JJ13
AK168423 BAE40335 Q3TH63
AK168525 BAE40404 Q7JJ13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Brd2 NP_034368 R.norvegicus Brd2 294276   NP_997660 99
H.sapiens BRD2 6046 Gene Info NP_001106653 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)