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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Bptf, bromodomain PHD finger transcription factor
Sequence ID:NM_176850
NM_001080832
Entrez Gene ID:207165
Ensembl ID:ENSMUSG00000040481

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E1|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 107035519 - 107036777


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3487914IncompleteBC003956fetal Alzheimer antigen
5345342IncompleteBC021489bromodomain PHD finger transcription factor
5353895IncompleteBC037661bromodomain PHD finger transcription factor
5368380IncompleteBC032289bromodomain PHD finger transcription factor

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_176850 NP_789820    

Related Sequences

 
mRNAGenPeptSwissProt
BC021489 AAH21489 Q8VDN7
BC032289 AAH32289 Q8K092
BC037661 AAH37661 Q8CFX5
BC060715 AAH60715 Q6P9L3
GU189417 ACZ69563 E5D6T0
AK082852 BAC38653 Q8C473
AK143675 BAE25490 Q3UPA6
AK165902 BAE38448 Q3TMJ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bptf NP_789820 H.sapiens BPTF 2186 Gene Info NP_872579 84
A.gambiae AgaP_AGAP006133 3290113   XP_316196 36
D.melanogaster E(bx) 44811   NP_001163305 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)