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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hcn1, hyperpolarization-activated, cyclic nucleotide-gated K+ 1
Sequence ID:NM_010408
Entrez Gene ID:15165
Ensembl ID:ENSMUSG00000021730

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 D2.3|13 67.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 117602699 - 117976802

NM_010408 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1776118391126118391901
7771200118445412118445835
12011362118598713118598874
13631581118662672118662890
15821728118691553118691699
17291969118714350118714590
19702134118760373118760537
21357911118764058118769834

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034538  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010408 NP_034538 O88704 cNMP_binding
Ion_trans
Ion_trans_N

Related Sequences

 
mRNAGenPeptSwissProt
AF028737 AAC53518 O88704
AJ225123 CAA12407 O88704

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hcn1 NP_034538 R.norvegicus Hcn1 84390   NP_445827 99
H.sapiens HCN1 348980 Gene Info NP_066550 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)