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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Aagab, alpha- and gamma-adaptin binding protein
Sequence ID:NM_025857
Entrez Gene ID:66939
Ensembl ID:ENSMUSG00000037257

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, limb, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 D

Chromosomal Position (from UCSC)

Chromosomal Position:9: 63636387 - 63641889

NM_025857 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11176345046163450577
1183086346449263464682
3094056346479463464890
4064956346531463465403
4965796346695463467037
5806626348311163483193
6637626348419063484289
7638676348684663486950
8689176348739963487448
91826006348801363489695

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3964905Full LengthBC027311RIKEN cDNA 2310007F21 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025857 NP_080133 Q8R2R3  

Related Sequences

 
mRNAGenPeptSwissProt
BC027311 AAH27311 Q8R2R3
AK009203 BAB26137 Q8R2R3
AK159897 BAE35463 Q8R2R3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aagab NP_080133 R.norvegicus Aagab 171435   NP_599225 95
H.sapiens AAGAB 79719 Gene Info NP_078942 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)