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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Ecm1, extracellular matrix protein 1
Sequence ID:NM_001252653
Entrez Gene ID:13601
Ensembl ID:ENSMUSG00000028108

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.1|3 45.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 95734148 - 95739566

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861715Full LengthBC138693extracellular matrix protein 1
9053939Full LengthBC145381extracellular matrix protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031925  

Protein Infomation

NM_001252653 NP_001239582    
NM_007899 NP_031925 Q61508 ECM1

Related Sequences

L33416 AAA37535 Q61508
BC138693 AAI38694 Q3TDX7
BC145381 AAI45382 B7ZNR0
AK153009 BAE31648 Q61508
AK153471 BAE32022 Q61508
AK159334 BAE34999 Q3TXB7
AK169939 BAE41471 Q3TDX7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Ecm1 NP_031925 R.norvegicus Ecm1 116662   NP_446334 90
H.sapiens ECM1 1893 Gene Info NP_004416 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)