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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Msh3, mutS homolog 3 (E. coli)
Sequence ID:NM_010829
Entrez Gene ID:17686
Ensembl ID:ENSMUSG00000014850

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 C3|13 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 92346519 - 92354985

 Exon Info From UCSC:
NM_010829

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9087670Full LengthBC150759mutS homolog 3 (E. coli)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034959  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010829 NP_034959   MutS_V
MutS_I
MutS_II
MutS_III

Related Sequences

 
mRNAGenPeptSwissProt
M24919 AAA40051 Q62156
P13705
M80360 AAA40052 P13705
BC040784 AAH40784 Q8CGC9
BC150759 AAI50760 B2RWY6
AK040616 BAC30646 Q8C9T6
AK161430 BAE36392 Q3TTD3
AK078467 BAE43365 Q3V2Z1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Msh3 NP_034959 R.norvegicus Msh3 499505   XP_574830 92
H.sapiens MSH3 4437 Gene Info NP_002430 82
A.thaliana MSH3 828659   NP_194284 44
N.crassa NCU08115 3880023   XP_963874 43
S.pombe msh3 2543392   NP_593952 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)